Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914042.1_cds_XP_016464061.1_57130
CDS Infomation

[gene=LOC107787058] [db_xref=GeneID:107787058] [protein=xyloglucan galactosyltransferase XLT2-like] [protein_id=XP_016464061.1] [location=join(12665..12785,12847..12923,13244..13351,13711..13799,15768..17334)] [gbkey=CDS]
Sequence

ATGGAGCATTTGAAGAGAGCTATTGGACATTTGAAGATGTATTTCTTGTCCTCCATCTCC
TGGAATAGCATGAGAGATGATTCTTTGATGCTTGAAATTTCGGTGAACGATCCCCTGGCT
TGTTGTGAGGGTGTTGACGGTGGATCTCCAGTGGTTTTGGGTGATGTTGGGGAATTGGTT
GCCATGGGTAGAAGATGGGTTAGAGGATCCTGGTTGGGAGGGAGGGGAGGAGATACAAAA
GTAGGAGGGTGGAAGGGGATTTGCGGGGGAAGGGATGAAAATTTTCCATTAGAGTTTTTG
GAGAAGTGGCTAGATTTGTTGAGGAGTGGAACAACTTTGGAGTTATCGAAGAGGTTGGAG
AGAGGGAATGTTTGTCCCTGGCATCAGCCGTCTGGACTAGATTCAGTCTCCATTTCTCAT
CAAATGCTTCCTCCTTACCCAGACGAGTCCCTAGAAGCCGATGAAACCCTACGCAAACCT
CCCAAAGCCAATAACAACGACTTTCTCAAGAATGCACTGAGCAATTTCCAGTACCAGATT
TCTACACACCCACGTTTCTGGCTTTTCACCTTCTTCCTCTTCTTCCAACTCGTTGTTCTC
ATTTTCACCCGCAATTCCCCCTTCCCTTTTTCAACCCACTCCCCACCCCACCACTTCCCT
TCAGAAACTGCATTATTTGCCGACATACAGAGACCCCCCCATCATGATCCAAATGTTATT
TATCCATTCGGAGATCCCCAATGCGAGTATGGTCGTGTTTATGTTTATAATCTCCCTTCC
AAATTCAACAAAGACTTAGCTTTAACTACCTGCGACGATCTAGACCCATGGAAGTGGCAG
TGTGGACTTGTCACCAATGACGGATACGGAAAAAGATTAACGGACCTCGCCGGAATCTTG
CCGGGAAATCTCTCCGCAGCGTGGTATCGGACAAATCAGTTCTCATCGGAGGTAATATTT
CATTACCGGCTTTTAAACTACAGATGTAGAACAAACGACCCGGATTCTGCTACTGCTTTC
TACATTCCGTTTTACGCCGGACAGGCTGTAGGGAAATACCTATGGACGGATGAAATTGAA
AACCGTGATTTGCTTAGCAATAAAGTATTGAAATGGGTCCAGAGGCAAAAGTACTGGAAA
AGATATAACGGGTCGGACCATTTCCTGACTCTGGGTCGGATAACGTGGGATTTCCGGCGA
TTAGGTGACCCGGAGAAACTGTGGGGTTCCACTTTTCTCAATCGGCCACAGATGCAGAAC
GTTTCGCGTTTCACCATCGAGAGGGCTCCGTGGGATGCAAATGATATCAGTGTACCTTAC
CCTACTGGATTCCACCCTCACTCCGAGAAAGAACTCAGGGAATGGCAGAACTTTGTGCTT
TCCTATAACCGCACGAGTCTTTTCACGTTCATTGGCGCGGCGCGTGGGGATATCAACAGT
GATTTCAGATCGAGGTTAATGAGTTACTGCAGAAACGAGTCGGACTCGTGCCGAGTCGTG
GATTGTGCCGTGACTCAGTGCTCTAACGGTTCGTCAGAAATCCAAAAAGCACTTTTGAGC
TCCGATTTTTGCTTACAGCCGAAAGGGGACAGCTTGACTCGGCGGTCGGTTTTCGATTGC
ATGGTGACCGGTTCAGTGCCGGTTTTTTTCTGGCGACGAACGGCTTACACGCAGTACCAG
TGGTTTTTACCGGAGAAACCGGGGAGTTATTCGGTTTTCATAGACCCGGAAGCAGTGAGA
AATGGAACGGCGTCCATTAAGGAAATATTGAAAAGTTACAGTAAAGATCAAGTAAGGAAA
ATGAGGGAGAAAGTAGTAGAAACAATTCCAAGAATAGTGTATGCAAGGCCAAGTGGAGGT
CTTGGGAGTGTAAAGGATGCATTTGAAATTGCAGTTGAAGGAGTATTGAAGAGAGTCAAG
GATGAAAATGAATGGAAGGAATACGTTGATATGGGCAGTTGA

Peptide Sequence

PEP ID

XP_016464061.1
PEP Infomation

PREDICTED: xyloglucan galactosyltransferase XLT2-like [Nicotiana tabacum]
Sequence

MEHLKRAIGHLKMYFLSSISWNSMRDDSLMLEISVNDPLACCEGVDGGSPVVLGDVGELV
AMGRRWVRGSWLGGRGGDTKVGGWKGICGGRDENFPLEFLEKWLDLLRSGTTLELSKRLE
RGNVCPWHQPSGLDSVSISHQMLPPYPDESLEADETLRKPPKANNNDFLKNALSNFQYQI
STHPRFWLFTFFLFFQLVVLIFTRNSPFPFSTHSPPHHFPSETALFADIQRPPHHDPNVI
YPFGDPQCEYGRVYVYNLPSKFNKDLALTTCDDLDPWKWQCGLVTNDGYGKRLTDLAGIL
PGNLSAAWYRTNQFSSEVIFHYRLLNYRCRTNDPDSATAFYIPFYAGQAVGKYLWTDEIE
NRDLLSNKVLKWVQRQKYWKRYNGSDHFLTLGRITWDFRRLGDPEKLWGSTFLNRPQMQN
VSRFTIERAPWDANDISVPYPTGFHPHSEKELREWQNFVLSYNRTSLFTFIGAARGDINS
DFRSRLMSYCRNESDSCRVVDCAVTQCSNGSSEIQKALLSSDFCLQPKGDSLTRRSVFDC
MVTGSVPVFFWRRTAYTQYQWFLPEKPGSYSVFIDPEAVRNGTASIKEILKSYSKDQVRK
MREKVVETIPRIVYARPSGGLGSVKDAFEIAVEGVLKRVKDENEWKEYVDMGS

Transcript Sequence

Gene sequence data has not been registered.